Keyword Search: Gene Ontology, PubMed or Web (Google)
PDB Keywords for 3PTF
(Keywords from the PDB file are used here. They may or may not correspond to GO term names).
- Protein-Protein Complex|E2|Ubiquitin|Ubiquitin Conjugating Enzyme|Alpha Beta|Ligase [GO] [PubMed] [Google]
GO Keywords for 3PTF
(Here all GO term names are given that map directly to this particular structure).
- negative regulation of transcription by RNA polymerase II [GO] [PubMed] [Google]
- ubiquitin ligase complex [GO] [PubMed] [Google]
- nucleotide binding [GO] [PubMed] [Google]
- protein polyubiquitination [GO] [PubMed] [Google]
- stimulatory C-type lectin receptor signaling pathway [GO] [PubMed] [Google]
- ubiquitin-protein transferase activity [GO] [PubMed] [Google]
- protein binding [GO] [PubMed] [Google]
- ATP binding [GO] [PubMed] [Google]
- nucleoplasm [GO] [PubMed] [Google]
- cytoplasm [GO] [PubMed] [Google]
- cytosol [GO] [PubMed] [Google]
- ubiquitin-dependent protein catabolic process [GO] [PubMed] [Google]
- protein ubiquitination [GO] [PubMed] [Google]
- transferase activity [GO] [PubMed] [Google]
- BMP signaling pathway [GO] [PubMed] [Google]
- anaphase-promoting complex-dependent catabolic process [GO] [PubMed] [Google]
- positive regulation of protein ubiquitination [GO] [PubMed] [Google]
- TRIF-dependent toll-like receptor signaling pathway [GO] [PubMed] [Google]
- Fc-epsilon receptor signaling pathway [GO] [PubMed] [Google]
- proteasome-mediated ubiquitin-dependent protein catabolic process [GO] [PubMed] [Google]
- T cell receptor signaling pathway [GO] [PubMed] [Google]
- obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle [GO] [PubMed] [Google]
- obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition [GO] [PubMed] [Google]
- obsolete regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle [GO] [PubMed] [Google]
- regulation of transcription from RNA polymerase II promoter in response to hypoxia [GO] [PubMed] [Google]
- ubiquitin conjugating enzyme activity [GO] [PubMed] [Google]
- protein K48-linked ubiquitination [GO] [PubMed] [Google]
- G2/M transition of mitotic cell cycle [GO] [PubMed] [Google]
- negative regulation of transcription by RNA polymerase II [GO] [PubMed] [Google]
- MAPK cascade [GO] [PubMed] [Google]
- activation of MAPK activity [GO] [PubMed] [Google]
- protein polyubiquitination [GO] [PubMed] [Google]
- nucleotide-excision repair, DNA damage recognition [GO] [PubMed] [Google]
- nucleotide-excision repair, DNA duplex unwinding [GO] [PubMed] [Google]
- protease binding [GO] [PubMed] [Google]
- stimulatory C-type lectin receptor signaling pathway [GO] [PubMed] [Google]
- MyD88-dependent toll-like receptor signaling pathway [GO] [PubMed] [Google]
- MyD88-independent toll-like receptor signaling pathway [GO] [PubMed] [Google]
- protein binding [GO] [PubMed] [Google]
- extracellular space [GO] [PubMed] [Google]
- nucleus [GO] [PubMed] [Google]
- nucleoplasm [GO] [PubMed] [Google]
- cytoplasm [GO] [PubMed] [Google]
- cytosol [GO] [PubMed] [Google]
- plasma membrane [GO] [PubMed] [Google]
- glycogen biosynthetic process [GO] [PubMed] [Google]
- transcription-coupled nucleotide-excision repair [GO] [PubMed] [Google]
- nucleotide-excision repair, preincision complex assembly [GO] [PubMed] [Google]
- nucleotide-excision repair, DNA incision, 5'-to lesion [GO] [PubMed] [Google]
- nucleotide-excision repair, DNA gap filling [GO] [PubMed] [Google]
- DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest [GO] [PubMed] [Google]
- transforming growth factor beta receptor signaling pathway [GO] [PubMed] [Google]
- Notch signaling pathway [GO] [PubMed] [Google]
- I-kappaB kinase/NF-kappaB signaling [GO] [PubMed] [Google]
- JNK cascade [GO] [PubMed] [Google]
- fibroblast growth factor receptor signaling pathway [GO] [PubMed] [Google]
- endosome membrane [GO] [PubMed] [Google]
- regulation of tumor necrosis factor-mediated signaling pathway [GO] [PubMed] [Google]
- regulation of necrotic cell death [GO] [PubMed] [Google]
- ubiquitin recycling [GO] [PubMed] [Google]
- Wnt signaling pathway [GO] [PubMed] [Google]
- endosomal transport [GO] [PubMed] [Google]
- macroautophagy [GO] [PubMed] [Google]
- viral life cycle [GO] [PubMed] [Google]
- virion assembly [GO] [PubMed] [Google]
- translesion synthesis [GO] [PubMed] [Google]
- negative regulation of transforming growth factor beta receptor signaling pathway [GO] [PubMed] [Google]
- endocytic vesicle membrane [GO] [PubMed] [Google]
- anaphase-promoting complex-dependent catabolic process [GO] [PubMed] [Google]
- regulation of type I interferon production [GO] [PubMed] [Google]
- negative regulation of type I interferon production [GO] [PubMed] [Google]
- tumor necrosis factor-mediated signaling pathway [GO] [PubMed] [Google]
- nucleotide-excision repair, DNA incision [GO] [PubMed] [Google]
- ion transmembrane transport [GO] [PubMed] [Google]
- TRIF-dependent toll-like receptor signaling pathway [GO] [PubMed] [Google]
- interstrand cross-link repair [GO] [PubMed] [Google]
- NIK/NF-kappaB signaling [GO] [PubMed] [Google]
- Fc-epsilon receptor signaling pathway [GO] [PubMed] [Google]
- ERBB2 signaling pathway [GO] [PubMed] [Google]
- negative regulation of epidermal growth factor receptor signaling pathway [GO] [PubMed] [Google]
- error-prone translesion synthesis [GO] [PubMed] [Google]
- DNA damage response, detection of DNA damage [GO] [PubMed] [Google]
- positive regulation of apoptotic process [GO] [PubMed] [Google]
- negative regulation of apoptotic process [GO] [PubMed] [Google]
- positive regulation of I-kappaB kinase/NF-kappaB signaling [GO] [PubMed] [Google]
- proteasome-mediated ubiquitin-dependent protein catabolic process [GO] [PubMed] [Google]
- myelin sheath [GO] [PubMed] [Google]
- regulation of mRNA stability [GO] [PubMed] [Google]
- cellular protein metabolic process [GO] [PubMed] [Google]
- innate immune response [GO] [PubMed] [Google]
- positive regulation of epidermal growth factor receptor signaling pathway [GO] [PubMed] [Google]
- positive regulation of transcription by RNA polymerase II [GO] [PubMed] [Google]
- T cell receptor signaling pathway [GO] [PubMed] [Google]
- positive regulation of NF-kappaB transcription factor activity [GO] [PubMed] [Google]
- stress-activated MAPK cascade [GO] [PubMed] [Google]
- obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle [GO] [PubMed] [Google]
- obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition [GO] [PubMed] [Google]
- Wnt signaling pathway, planar cell polarity pathway [GO] [PubMed] [Google]
- regulation of transcription from RNA polymerase II promoter in response to hypoxia [GO] [PubMed] [Google]
- extracellular exosome [GO] [PubMed] [Google]
- nucleotide-binding oligomerization domain containing signaling pathway [GO] [PubMed] [Google]
- global genome nucleotide-excision repair [GO] [PubMed] [Google]
- error-free translesion synthesis [GO] [PubMed] [Google]
- intracellular transport of virus [GO] [PubMed] [Google]
- negative regulation of canonical Wnt signaling pathway [GO] [PubMed] [Google]
- positive regulation of canonical Wnt signaling pathway [GO] [PubMed] [Google]
- regulation of signal transduction by p53 class mediator [GO] [PubMed] [Google]
- G2/M transition of mitotic cell cycle [GO] [PubMed] [Google]
- negative regulation of transcription by RNA polymerase II [GO] [PubMed] [Google]
- MAPK cascade [GO] [PubMed] [Google]
- activation of MAPK activity [GO] [PubMed] [Google]
- protein polyubiquitination [GO] [PubMed] [Google]
- nucleotide-excision repair, DNA damage recognition [GO] [PubMed] [Google]
- nucleotide-excision repair, DNA duplex unwinding [GO] [PubMed] [Google]
- stimulatory C-type lectin receptor signaling pathway [GO] [PubMed] [Google]
- MyD88-dependent toll-like receptor signaling pathway [GO] [PubMed] [Google]
- MyD88-independent toll-like receptor signaling pathway [GO] [PubMed] [Google]
- protein binding [GO] [PubMed] [Google]
- extracellular space [GO] [PubMed] [Google]
- nucleus [GO] [PubMed] [Google]
- nucleoplasm [GO] [PubMed] [Google]
- cytoplasm [GO] [PubMed] [Google]
- mitochondrion [GO] [PubMed] [Google]
- cytosol [GO] [PubMed] [Google]
- plasma membrane [GO] [PubMed] [Google]
- glycogen biosynthetic process [GO] [PubMed] [Google]
- transcription-coupled nucleotide-excision repair [GO] [PubMed] [Google]
- nucleotide-excision repair, preincision complex assembly [GO] [PubMed] [Google]
- nucleotide-excision repair, DNA incision, 5'-to lesion [GO] [PubMed] [Google]
- nucleotide-excision repair, DNA gap filling [GO] [PubMed] [Google]
- DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest [GO] [PubMed] [Google]
- transforming growth factor beta receptor signaling pathway [GO] [PubMed] [Google]
- Notch signaling pathway [GO] [PubMed] [Google]
- I-kappaB kinase/NF-kappaB signaling [GO] [PubMed] [Google]
- JNK cascade [GO] [PubMed] [Google]
- fibroblast growth factor receptor signaling pathway [GO] [PubMed] [Google]
- endosome membrane [GO] [PubMed] [Google]
- regulation of tumor necrosis factor-mediated signaling pathway [GO] [PubMed] [Google]
- regulation of necrotic cell death [GO] [PubMed] [Google]
- Wnt signaling pathway [GO] [PubMed] [Google]
- endosomal transport [GO] [PubMed] [Google]
- macroautophagy [GO] [PubMed] [Google]
- viral life cycle [GO] [PubMed] [Google]
- virion assembly [GO] [PubMed] [Google]
- translesion synthesis [GO] [PubMed] [Google]
- negative regulation of transforming growth factor beta receptor signaling pathway [GO] [PubMed] [Google]
- endocytic vesicle membrane [GO] [PubMed] [Google]
- anaphase-promoting complex-dependent catabolic process [GO] [PubMed] [Google]
- positive regulation of protein ubiquitination [GO] [PubMed] [Google]
- regulation of type I interferon production [GO] [PubMed] [Google]
- negative regulation of type I interferon production [GO] [PubMed] [Google]
- tumor necrosis factor-mediated signaling pathway [GO] [PubMed] [Google]
- nucleotide-excision repair, DNA incision [GO] [PubMed] [Google]
- ion transmembrane transport [GO] [PubMed] [Google]
- TRIF-dependent toll-like receptor signaling pathway [GO] [PubMed] [Google]
- interstrand cross-link repair [GO] [PubMed] [Google]
- NIK/NF-kappaB signaling [GO] [PubMed] [Google]
- Fc-epsilon receptor signaling pathway [GO] [PubMed] [Google]
- ERBB2 signaling pathway [GO] [PubMed] [Google]
- negative regulation of epidermal growth factor receptor signaling pathway [GO] [PubMed] [Google]
- error-prone translesion synthesis [GO] [PubMed] [Google]
- DNA damage response, detection of DNA damage [GO] [PubMed] [Google]
- neuron projection [GO] [PubMed] [Google]
- neuronal cell body [GO] [PubMed] [Google]
- positive regulation of apoptotic process [GO] [PubMed] [Google]
- negative regulation of apoptotic process [GO] [PubMed] [Google]
- positive regulation of I-kappaB kinase/NF-kappaB signaling [GO] [PubMed] [Google]
- proteasome-mediated ubiquitin-dependent protein catabolic process [GO] [PubMed] [Google]
- regulation of mRNA stability [GO] [PubMed] [Google]
- cellular protein metabolic process [GO] [PubMed] [Google]
- innate immune response [GO] [PubMed] [Google]
- positive regulation of epidermal growth factor receptor signaling pathway [GO] [PubMed] [Google]
- positive regulation of transcription by RNA polymerase II [GO] [PubMed] [Google]
- mitochondrion transport along microtubule [GO] [PubMed] [Google]
- neuron projection morphogenesis [GO] [PubMed] [Google]
- T cell receptor signaling pathway [GO] [PubMed] [Google]
- positive regulation of NF-kappaB transcription factor activity [GO] [PubMed] [Google]
- stress-activated MAPK cascade [GO] [PubMed] [Google]
- obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle [GO] [PubMed] [Google]
- obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition [GO] [PubMed] [Google]
- regulation of mitochondrial membrane potential [GO] [PubMed] [Google]
- Wnt signaling pathway, planar cell polarity pathway [GO] [PubMed] [Google]
- regulation of proteasomal protein catabolic process [GO] [PubMed] [Google]
- regulation of transcription from RNA polymerase II promoter in response to hypoxia [GO] [PubMed] [Google]
- extracellular exosome [GO] [PubMed] [Google]
- nucleotide-binding oligomerization domain containing signaling pathway [GO] [PubMed] [Google]
- global genome nucleotide-excision repair [GO] [PubMed] [Google]
- error-free translesion synthesis [GO] [PubMed] [Google]
- intracellular transport of virus [GO] [PubMed] [Google]
- negative regulation of canonical Wnt signaling pathway [GO] [PubMed] [Google]
- positive regulation of canonical Wnt signaling pathway [GO] [PubMed] [Google]
- regulation of neuron death [GO] [PubMed] [Google]
- regulation of signal transduction by p53 class mediator [GO] [PubMed] [Google]
- positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator [GO] [PubMed] [Google]
- positive regulation of protein monoubiquitination [GO] [PubMed] [Google]
