Comprehensive Bending Classification of Nucleic Acid Double Helix Structures
Abbreviations
PDB Protein Data Bank
NDB Nucleic Acid Database
E IMB Jena Image Library Entry Page
H IMB Jena Image Library Helix Analysis Page (information on helical parameters)
B IMB Jena Image Library Bending Page (information on bending parameters)
bp base pair number
diff diffraction
model theoretical model
NMR nuclear magnetic resonance spectroscopy
prot protein
nuc nucleic acid
prot-nuc protein-nucleic acid complex
carb carbohydrate
plane plane
In the entry bending pages
arc stands for circular line,
kinked line for single-kink line
double kinked line for double-kink line.
s(2) goodness of fit
r, a, a1, a2, o, l1, l2, l3 geometry parameters (definition)